| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Aruwimi | River (basin) | native | 106290 |
| Congo | River (basin) | endemic | 59215 |
| Ethiopian | Zoogeographic realm | endemic | 5331 |
| Itimbiri | River (basin) | native | 42032 |
| Lindi-Tshopo | River (basin) | native | 42032 |
| Lower Congo | River (basin) | native | 59215 |
| Lualaba | River (basin) | native | 42032 |
| Middle Congo | River (basin) | native | 42032 |
| Ruki | River (basin) | native | 42032 |
| Wagenia Falls | River (basin) | native | 106245 |