| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 5736 |
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Bay of Bengal | Sea/Bay/Gulf | native | 2113 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 2113 |
| Gulf of Tonkin | Sea/Bay/Gulf | native | 130538 |
| Indian Ocean | Sea/Bay/Gulf | native | 3490 |
| Indonesian Sea | Sea/Bay/Gulf | native | 2113 |
| Oriental | Zoogeographic realm | native | 45255 |
| Pacific Ocean | Sea/Bay/Gulf | native | 2113 |
| San Miguel Bay | Sea/Bay/Gulf | native | 43275 |
| Sikao Creek | River (basin) | native | 52823 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 125575 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 2858 |