| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 5222 |
| Bay of Bengal | Sea/Bay/Gulf | native | 5222 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| East China Sea | Sea/Bay/Gulf | native | 4787 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 5222 |
| Indian Ocean | Sea/Bay/Gulf | questionable | 5222 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5222 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | introduced | 6362 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | introduced | 559 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Leyte Gulf | Sea/Bay/Gulf | native | 31411 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Milne Bay | Sea/Bay/Gulf | native | 41468 |
| North Australian Shelf | Sea/Bay/Gulf | native | 4787 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 4787 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 4787 |
| Pacific Ocean | Sea/Bay/Gulf | native | 4787 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46241 |
| Sea of Japan/East Sea | Sea/Bay/Gulf | native | 559 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 119494 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Spratly Islands | Sea/Bay/Gulf | native | 48445 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 4787 |
| Tayabas Bay | Sea/Bay/Gulf | native | 82367 |
| Verde Island Passage | Sea/Bay/Gulf | native | 6956 |
| Yellow Sea | Sea/Bay/Gulf | native | 4787 |