| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Chiku River | River (basin) | native | 36073 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Indian Ocean | Sea/Bay/Gulf | native | 188 |
| Indonesian Sea | Sea/Bay/Gulf | native | 188 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7300 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| Shiliao River | River (basin) | native | 36073 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Verde Island Passage | Sea/Bay/Gulf | native | 107093 |
| Yellow Sea | Sea/Bay/Gulf | native | 188 |