| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agnébi | River (basin) | native | 57127 |
| Bandama | River (basin) | native | 57127 |
| Bia | River (basin) | native | 272 |
| Boubo | River (basin) | native | 57127 |
| Cavally | River (basin) | native | 57127 |
| Cess | River (basin) | native | 57127 |
| Comoé | River (basin) | native | 57127 |
| Congo | River (basin) | misidentification | 43912 |
| Ébrié | Lagoon | native | 57127 |
| Eholié | River (basin) | native | 83625 |
| Ethiopian | Zoogeographic realm | endemic | 3570 |
| Farmington | River (basin) | native | 57127 |
| Ouémé | River (basin) | questionable | 43912 |
| Pra | River (basin) | native | 57127 |
| Saint John | River (basin) | native | 57127 |
| Saint Paul | River (basin) | native | 57127 |
| San Pedro | River (basin) | native | 57127 |
| Sangha | River (basin) | misidentification | 43912 |
| Sassandra | River (basin) | native | 57127 |
| Sehnkwehn | River (basin) | native | 43912 |
| Tano | River (basin) | native | 57127 |
| Volta | Lake | questionable | 43912 |
| Wouri | River (basin) | misidentification | 43912 |