| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Apalachicola River | River (basin) | native | 86798 |
| Choctawhatchee River | River (basin) | native | 86798 |
| Escambia River | River (basin) | native | 86798 |
| Nearctic | Zoogeographic realm | endemic | 5723 |
| Tallapoosa River | River (basin) | introduced | 86798 |