| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Chiku River | River (basin) | native | 36073 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Erhjen River | River (basin) | native | 36073 |
| Gulf of Oman | Sea/Bay/Gulf | native | 47613 |
| Honda Bay | Sea/Bay/Gulf | native | 71000 |
| Indian Ocean | Sea/Bay/Gulf | native | 45255 |
| Kaoping River | River (basin) | native | 36073 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Leyte Gulf | Sea/Bay/Gulf | native | 31411 |
| Malacca Strait | Sea/Bay/Gulf | native | 121464 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3424 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3424 |
| Pagbilao Bay | Sea/Bay/Gulf | native | 11338 |
| Persian Gulf | Sea/Bay/Gulf | native | 47613 |
| Ruerhmen River | River (basin) | native | 36073 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46240 |
| Shihtsao River | River (basin) | native | 36073 |
| Shiliao River | River (basin) | native | 36073 |
| South China Sea | Sea/Bay/Gulf | native | 2682 |
| Southern China | Sea/Bay/Gulf | native | 119494 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 393 |
| Tayabas Bay | Sea/Bay/Gulf | native | 47588 |
| Tsengwen River | River (basin) | native | 36073 |
| Tung-hsiao | Sea/Bay/Gulf | native | 43510 |