| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Aruwimi | River (basin) | questionable | 26192 |
| Bangweulu | River (basin) | native | 26192 |
| Congo | River (basin) | endemic | 26192 |
| Ethiopian | Zoogeographic realm | endemic | 26192 |
| Kasai | River (basin) | native | 26192 |
| Kotto | River (basin) | native | 26192 |
| Kwango | River (basin) | native | 26192 |
| Lindi-Tshopo | River (basin) | questionable | 26192 |
| Mweru | Lake | native | 361 |
| Sangha | River (basin) | native | 26192 |
| Tanganyika | Lake | questionable | 26192 |
| Ubangui | River (basin) | native | 26192 |
| Upper Lualaba | River (basin) | native | 26192 |
| Wagenia Falls | River (basin) | native | 106245 |