| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 125614 |
| Cape Howe | Sea/Bay/Gulf | native | 125614 |
| Central and Southern Great Barrier Reef | Sea/Bay/Gulf | native | 125614 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 6871 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 6871 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 125614 |
| Fiji Islands | Sea/Bay/Gulf | native | 85272 |
| Houtman | Sea/Bay/Gulf | native | 125614 |
| Indian Ocean | Sea/Bay/Gulf | native | 94780 |
| Leeuwin | Sea/Bay/Gulf | native | 125614 |
| Manning-Hawkesbury | Sea/Bay/Gulf | native | 125614 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 127228 |
| Ogasawara Islands | Sea/Bay/Gulf | native | 125614 |
| Pacific Ocean | Sea/Bay/Gulf | native | 6871 |
| Polynesian Waters | Sea/Bay/Gulf | native | 94780 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southeast Madagascar | Sea/Bay/Gulf | native | 125614 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 47737 |
| Tweed-Moreton | Sea/Bay/Gulf | native | 125614 |
| Western and Northern Madagascar | Sea/Bay/Gulf | native | 125614 |