| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Indonesian Sea | Sea/Bay/Gulf | native | 4859 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 4859 |
| Pacific Ocean | Sea/Bay/Gulf | native | 4859 |
| Panay Gulf | Sea/Bay/Gulf | native | 42831 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45334 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 128223 |
| Southern Palawan | Sea/Bay/Gulf | native | 58652 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 42484 |
| Tañon Strait | Sea/Bay/Gulf | native | 27943 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 57038 |
| Yellow Sea | Sea/Bay/Gulf | native | 4859 |